Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq10 223 1e-55 >seq10 Length=3094 Score = 223 bits (246), Expect = 1e-55 Identities = 260/349 (74%), Gaps = 13/349 (4%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||| | ||||||| |||||||||||||||| |||| ||||| |||||| ||| ||| Sbjct 3090 ACAGGCGTTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTTGGTTAAATCCTTTAAC 3031 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCA-------TCATTAAGTTGG-GCACTCTAAGTTG 267 ||||||||||| || |||||||| | | |||| | ||||||||| Sbjct 3030 GAGCGCAACCCCTATTATTAGTTGCTAATTTATTTTATTATATAAAAGCACTCTAATAAA 2971 Query 268 ACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGA 327 | || | ||| | | |||||||| |||| |||||||| || ||||| ||||||||| Sbjct 2970 AATGTCAATGATAGGTTGAAGGAAGGTAGGGATGACGTCAAGTCTTCATGGCCCTTATGA 2911 Query 328 TTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCG----AGGT 383 |||||||||||||||||||||||| | ||||| | | || | | | | | Sbjct 2910 GTTGGGCTACACACGTGCTACAATGATAATTACAATGAGAGGCAATAATGATTAAAAATT 2851 Query 384 CAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGA 443 |||||||| ||| || | || |||||||||| | | ||| |||||| | |||||| Sbjct 2850 GGAGCAAATCTTTAAAAATTAT-CTTAGTTCGGATTATGGGCTGAAACTCGCCCATATGA 2792 Query 444 AGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492 ||||||||||||||||||||| ||| ||||||||| ||||||||| ||| Sbjct 2791 AGCTGGAATCGCTAGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 2743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503999744320