Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01]
17 sequences; 24,114,851 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq10 223 1e-55
>seq10
Length=3094
Score = 223 bits (246), Expect = 1e-55
Identities = 260/349 (74%), Gaps = 13/349 (4%)
Strand=Plus/Minus
Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215
||||| | ||||||| |||||||||||||||| |||| ||||| |||||| ||| |||
Sbjct 3090 ACAGGCGTTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTTGGTTAAATCCTTTAAC 3031
Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCA-------TCATTAAGTTGG-GCACTCTAAGTTG 267
||||||||||| || |||||||| | | |||| | |||||||||
Sbjct 3030 GAGCGCAACCCCTATTATTAGTTGCTAATTTATTTTATTATATAAAAGCACTCTAATAAA 2971
Query 268 ACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGA 327
| || | ||| | | |||||||| |||| |||||||| || ||||| |||||||||
Sbjct 2970 AATGTCAATGATAGGTTGAAGGAAGGTAGGGATGACGTCAAGTCTTCATGGCCCTTATGA 2911
Query 328 TTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCG----AGGT 383
|||||||||||||||||||||||| | ||||| | | || | | | | |
Sbjct 2910 GTTGGGCTACACACGTGCTACAATGATAATTACAATGAGAGGCAATAATGATTAAAAATT 2851
Query 384 CAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGA 443
|||||||| ||| || | || |||||||||| | | ||| |||||| | ||||||
Sbjct 2850 GGAGCAAATCTTTAAAAATTAT-CTTAGTTCGGATTATGGGCTGAAACTCGCCCATATGA 2792
Query 444 AGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492
||||||||||||||||||||| ||| ||||||||| ||||||||| |||
Sbjct 2791 AGCTGGAATCGCTAGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 2743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503999744320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |