Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq9 114 3e-23 >seq9 Length=4112 Score = 114 bits (126), Expect = 3e-23 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || |||||||||||||||||| ||||| ||||||||||||||| | ||||| || ||| Sbjct 502 GGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGTGTACAAAGGTAAGCTC 561 Query 187 AGCTTGGATGGAA--ACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 | |||||| | | || | | || | || || ||||| || ||||||| | | Sbjct 562 AAATTGGATAATATTATCAATTGTAGAGCGTAATGGTAAAAGCTTGCTTGACTGTAAGAT 621 Query 245 CCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGG 304 || || | |||||||||||||||| | || ||||||| | || ||||| | Sbjct 622 AGACATATCAAACAGGGACGAAAGTCGGTCATAGTGATCCGATAATTCTTTGTGGAAAGA 681 Query 305 CCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| ||||||||||| ||| | ||||||| Sbjct 682 TTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982399832992