Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 8e-16 >seq5 Length=3690501 Score = 89.7 bits (98), Expect = 8e-16 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 |||||||| || | | |||||||||||||||||| | ||||| ||||| ||||| | Sbjct 2374647 GGCGCTTCCTCGATGATCTTCTGGTGACGACGTTGGACGGAGCACTCGCGCTCGCCGGCG 2374588 Query 127 TGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTC 186 ||||| |||| |||||||||| | || |||||||| | |||||| | | | || Sbjct 2374587 TGGATAACGTGCCCCTGGCCGTTACCAAAGACCTGCACTTCAATGTGACGCGCG-CGCTC 2374529 Query 187 -AGGTACTTTTCCAGGTAGAC 206 | |||||| |||||| |||| Sbjct 2374528 AATGTACTTCTCCAGGAAGAC 2374508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735999878790