Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq9 201 4e-49 >seq9 Length=4112 Score = 201 bits (222), Expect = 4e-49 Identities = 339/490 (69%), Gaps = 32/490 (7%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 555 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 497 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 || ||| || | || |||| ||| | | | |||||||| Sbjct 496 TACAATGTTT---------ATTTTTAAA-AATATTAGTTATTTATTTTAATAAGAGTGGT 447 Query 196 ATTTCAACAACGACTCCACAAC-CACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || |||| |||||||||| | ||| || |||||| ||| || Sbjct 446 ATTTCAAGATTATCTAAACAATTCACTAGCGTGAAGGTTTCAAAGATTCCCACTTATGCT 387 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 386 ACACATATTAGATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 327 Query 314 CCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAG 373 | | ||| ||||||| || || | ||| ||||| | | || | | ||| Sbjct 326 CTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAG 267 Query 374 ACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 266 ACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCG 207 Query 434 CTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCA 493 ||||||||||| || | |||||| ||||||||||||||| |||| ||| | || | Sbjct 206 CTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATG-CTTA 148 Query 494 CACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTC 553 ||| | |||| |||| |||||||||||||||||| ||||| | Sbjct 147 AACATC------------------TCCTATTAATCTTCCAGCACCGGGCAGGTGTCAGAC 106 Query 554 CGTATACCTC 563 | ||||| || Sbjct 105 CCTATACATC 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702399710592