Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1 102 3e-16 >seq1 Length=5948321 Score = 102 bits (112), Expect = 3e-16 Identities = 117/154 (76%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | |||||||||||||| ||||| || || Sbjct 3204435 CCGATGGTCATACGCGACGGAATGGCGTGGGGGTTGATGATGATATCAGGAGTGATACCC 3204494 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || | ||||| ||||| | || | || || ||| ||| ||||||||| ||||| || | Sbjct 3204495 TCGCCAGTAAACGGCATGTCCTCCTGGCGGTACG-TGATACCAATGGTACCCTTCTGTCC 3204553 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | || || ||||||||||||||||| ||||| Sbjct 3204554 GTGACGCGACGCAAACTTGTCGCCAAT--CTGGG 3204585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885989448181