Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq8 123 5e-26 >seq8 Length=2114789 Score = 123 bits (136), Expect = 5e-26 Identities = 185/257 (72%), Gaps = 12/257 (5%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTC----C 105 || ||||||||||||| | | | || ||||| ||||| ||||||| || || | Sbjct 939422 TCGCCGTGGTTGCCCTGCTCACCGGTGAGTCCGAAGAGGCGTTCCTTGA-GAATCGGGTC 939480 Query 106 ATCGCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCC 165 | || |||||||||| |||| | | |||| | || || ||||| || || Sbjct 939481 CTTGC---CGTTCCACAGCGCCATGGAGAAGCACAAGCGCTGGTGGTTGTCCGAGATACC 939537 Query 166 CGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTG--CATGGTCATGGGGGAAG 223 ||||| ||||||||| ||||| ||||| |||||||| | || ||| |||| |||||| Sbjct 939538 CGCCATGCCGTCCTCTCCCCAGCGGTACGCGCGGCT-CTTGGCCAT-GTCAAAGGGGAAC 939595 Query 224 TAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCG 283 || ||| || ||||| | ||| |||||||| ||||| || |||||||| ||||| || Sbjct 939596 GAGTTCCACGCATCGCCGTTGGCACTGTAGTCCTCGCGGACGGTGCCCCACTGGCGCTCC 939655 Query 284 CTCAGGTAGGGGCCCCA 300 ||||| || ||||| Sbjct 939656 GAGAGGTACGGACCCCA 939672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999737920