Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5 114 5e-20 >seq5 Length=2819049 Score = 114 bits (126), Expect = 5e-20 Identities = 115/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | ||||||||||| ||||| ||||| ||||| Sbjct 1849438 CCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATAATGTCCGGCACAATGCCC 1849379 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || || ||||| | || | || || ||| ||| ||||||||| ||||| || | Sbjct 1849378 TCGGCCGTGAACGGCATGTCCTCCTGGCGGTACG-TGATACCAATGGTACCCTTCTGTCC 1849320 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||||||||| Sbjct 1849319 GTGACGCGACGCAAACTTGTCGCCAAT 1849293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885772097218