Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 100 1e-15 >seq6 Length=1458149 Score = 100 bits (110), Expect = 1e-15 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 89109 GCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCGGCC 89168 || || ||| | || || ||||||||||| ||||||||||| |||||||| || ||| Sbjct 918396 GCCTCGTGCGCCCCGCCTATCCGTTACCCTAACGTGTACGGTATCGACATGCCTTCGCAG 918455 Query 89169 AAGGAGCTCATTGCTTCTGGTCGCACCGAGC-ACGAGGTGGCTCTCCTCCTCGGAGCCGA 89227 |||||||| | |||| ||| |||| ||| | | ||| | || | | | || ||||| Sbjct 918456 CAGGAGCTCGTCGCTTATGGCCGCA-CGACCGAGGAGATTGCCGAGCACATTGGCGCCGA 918514 Query 89228 CCAGGTCATCTATCAGAGTGTCGACGACTTGCAAGCGGCCTGTCGCCAGTTCAATCCCTC 89287 | |||||||| |||| | | |||||| | | | | ||||||||| |||| || | Sbjct 918515 TCTCGTCATCTACCAGACTATGGACGACCTTGTCGAGTCGTGTCGCCAGATCAACCCTGC 918574 Query 89288 CATCACGGCCTTTGAGGCCTCTGTCTTTGTCGGC 89321 |||| | ||||| ||| |||||| |||| Sbjct 918575 CATCGAGAAGTTTGACTGCTCAGTCTTTACCGGC 918608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737530905678