Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8 129 9e-28 >seq8 Length=1346441 Score = 129 bits (142), Expect = 9e-28 Identities = 165/225 (73%), Gaps = 22/225 (10%) Strand=Plus/Minus Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61 ||||||| ||||||| ||| |||| ||||||| | |||| |||| ||| || Sbjct 251885 TACAAAGCGCAGGGATGTAATCAAGGCGAGCTGGTGAACTCACGCTCACT--GA------ 251834 Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 ||||||| ||| ||||||||| |||||||||| ||| | ||||||| ||||||| Sbjct 251833 ---TTGAAGATCAATAATTGCAATTCTCTATCCCCAGCACAACTGAATTTCACAAGATTA 251777 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | | | |||| || | || | | | | ||||||||||| | ||| | Sbjct 251776 CCAAAGCTTCTT-----AGGTTATCG-CTGGCTTAGT----CAGTGTAGCGCACATGCCG 251727 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct 251726 CCCAGAAAATCTAAGGGCATCATAGACCTGTTATTACCTCAAACT 251682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999730455