Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01]
37 sequences; 25,989,348 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq8 129 9e-28
>seq8
Length=1346441
Score = 129 bits (142), Expect = 9e-28
Identities = 165/225 (73%), Gaps = 22/225 (10%)
Strand=Plus/Minus
Query 2 TACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCC 61
||||||| ||||||| ||| |||| ||||||| | |||| |||| ||| ||
Sbjct 251885 TACAAAGCGCAGGGATGTAATCAAGGCGAGCTGGTGAACTCACGCTCACT--GA------ 251834
Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120
||||||| ||| ||||||||| |||||||||| ||| | ||||||| |||||||
Sbjct 251833 ---TTGAAGATCAATAATTGCAATTCTCTATCCCCAGCACAACTGAATTTCACAAGATTA 251777
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|| | | | |||| || | || | | | | ||||||||||| | ||| |
Sbjct 251776 CCAAAGCTTCTT-----AGGTTATCG-CTGGCTTAGT----CAGTGTAGCGCACATGCCG 251727
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
||||||| |||||||||||||| |||||||||||| |||||||||
Sbjct 251726 CCCAGAAAATCTAAGGGCATCATAGACCTGTTATTACCTCAAACT 251682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999730455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |