Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01]
37 sequences; 25,989,348 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 4e-40
>seq8
Length=1346441
Score = 170 bits (188), Expect = 4e-40
Identities = 173/224 (77%), Gaps = 21/224 (9%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
||||||||| |||||||||||| |||||||||||||| |||||||| ||| | |||||||
Sbjct 251682 AGTTTGAGGTAATAACAGGTCTATGATGCCCTTAGATTTTCTGGGCGGCATGTGCGCTAC 251741
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| ||||| || || |||| |||| | | ||||||||||| ||| |
Sbjct 251742 ACTGACTAAGCCAGCG-----ATAACCT----AAGAAGCT-TTGGTAATCTTGTGAAATT 251791
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| || ||||||||||||||| ||||||||||||| ||||||| ||| ||
Sbjct 251792 CAGTTGTGCTGGGGATAGAGAATTGCAATTATTGATCTTCAA----------TCAGTGAG 251841
Query 286 CGCGTG-TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| | | ||| |||| ||| |||||||| ||||||| |||||||
Sbjct 251842 CGTGAGTTCACCAGCTCGCCTTGATTACATCCCTGCGCTTTGTA 251885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199649536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |