Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 183 9e-44 >seq1 Length=6129537 Score = 183 bits (202), Expect = 9e-44 Identities = 116/125 (93%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 381 TAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 ||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||| || Sbjct 5697484 TAGTAAGATACCATCAAATAAACTATAACTGATTTAATGAGCCATTHGCAGTTTCACAGT 5697543 Query 441 ATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 || ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5697544 ATGAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 5697603 Query 500 GGCAG 504 ||||| Sbjct 5697604 GGCAG 5697608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399441152