Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 6e-13 >seq2 Length=4282893 Score = 91.5 bits (100), Expect = 6e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133 ||| || |||||||||||| | |||| || ||| || ||||| || || || | Sbjct 408082 CGTTGATAATCTCCTTGAGACGAGGCACACCACCGGTGACCGACTTGGACGACACACCAG 408023 Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193 | |||||||||| | ||| |||| ||||||| ||| || || ||| ||||| | |||| Sbjct 408022 CGTAGTGGAAGGTGTTGAGCGTCATCTGCGTGGCGGGTTCACCAATGGACTGGGCAGCGA 407963 Query 349194 GGATGCCTACCATCTCGCCGGGCGC 349218 || |||| |||||||| |||| || Sbjct 407962 GGGTGCCGACCATCTCCGCGGGGGC 407938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738187598526