Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 6e-13 >seq3 Length=3276928 Score = 91.5 bits (100), Expect = 6e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | |||||||||| ||||| ||||| || || Sbjct 2384996 CCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGACAATGTCGGGCACAATACCC 2385055 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAG-GAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || || ||||| || || | | ||| ||| ||||||||| ||||| || | Sbjct 2385056 TCGGCAGTGAACGGCATGTCCTCTTGCCTGTACG-TGATACCAATGGTACCCTTCTGACC 2385114 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||| ||||| Sbjct 2385115 GTGACGCGACGCAAACTTGTCTCCAAT 2385141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885506446041