Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20veenhuisii_20[genbank_20GCA_5F001600595.1_202016-03- 01] 35 sequences; 31,617,680 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 1e-14 >seq3 Length=3222897 Score = 96.9 bits (106), Expect = 1e-14 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| |||||||||| | | ||||||||||| ||||| || ||||| Sbjct 633877 CCGATGGTCATACGCGAGGGAATGGCGTGCGGGTTGATGATAATGTCGGGTGTGATGCCC 633936 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || | || || ||||| | || | || || ||| ||| ||||||||| ||||| || | Sbjct 633937 TCGCCCGTGAACGGCATGTCCTCCTGGCGGTACG-TGATACCAATGGTACCCTTCTGACC 633995 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || ||||||||||| ||||| Sbjct 633996 GTGACGCGACGCAAACTTGTCACCAAT 634022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885554746255