Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4000 280 2e-73 seq1155 277 3e-72 >seq4000 Length=10826 Score = 280 bits (310), Expect = 2e-73 Identities = 203/231 (88%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2220 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGTATT-C 2277 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 2278 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 2337 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 2338 ACCCGGACCTTCCGGCCAAGGAAAAAAACTCGCTGGACCTGTCAGTGTAGCGCGCGTGCG 2397 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2398 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 2448 >seq1155 Length=10417 Score = 277 bits (306), Expect = 3e-72 Identities = 203/231 (88%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2088 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGTATT-C 2145 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||||| |||||| Sbjct 2146 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTCACAAGATT 2205 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 2206 ACCCGGACCTTCCGGCCAAGGAAAAA-ACTCGCTGGACCTGTCAGTGTAGCGCGCGTGCG 2264 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2265 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 2315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751935025085