Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4000 149 3e-34 seq1155 149 3e-34 seq7799 102 5e-20 >seq4000 Length=10826 Score = 149 bits (164), Expect = 3e-34 Identities = 103/117 (88%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||| | || | | | || |||| Sbjct 2749 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCAACACATTAATCTGAGATTGCCC 2808 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 2809 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2865 >seq1155 Length=10417 Score = 149 bits (164), Expect = 3e-34 Identities = 103/117 (88%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||| | || | | | || |||| Sbjct 2616 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCAACACATTAATCTGAGATTGCCC 2675 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 2676 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 2732 >seq7799 Length=2060 Score = 102 bits (112), Expect = 5e-20 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||| |||||||||| ||| | || | | | || |||| Sbjct 1152 GAACCCAAAGACTTTGATTTCTTGTAAGGTGCCAAGCAACACATTAATCTGAGATTGCCC 1093 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATC 104 |||||||||||||||||||||| ||||| ||||| | ||| || Sbjct 1092 AATCCCTAGTCGGCATAGTTTACTGTTAAAACTACAATGGTGTC 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278376721410