Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4000 352 5e-95 seq1155 352 5e-95 seq1793 329 6e-88 >seq4000 Length=10826 Score = 352 bits (390), Expect = 5e-95 Identities = 270/317 (85%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG---CATGCCCTTCACTGGGTGTGC--CGG 61 || |||| ||| ||| ||| ||| || ||| | | |||||| |||||| | ||| Sbjct 3182 GTTCGGCTGGGTCTTACCTCTTGGTGAGCCGGTTCGTATCCTTCATTGGGTGCGGGTCGG 3123 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 ||| ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||| Sbjct 3122 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 3063 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3062 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGC 3003 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||||||| ||||| | ||||||| | | |||||||||||||| Sbjct 3002 CGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTGAAATTCT 2943 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||| | ||||||| |||||||||||||| | |||||||||||||||||||||| Sbjct 2942 TGGATTGACTGAAGACCGACTACTGCGAAAGCATCTGCCAAGGATGTTTTCATTAATCA- 2884 Query 302 TGAACGAAAGTTAGGGG 318 ||||||| |||||||| Sbjct 2883 AGAACGAAGGTTAGGGG 2867 >seq1155 Length=10417 Score = 352 bits (390), Expect = 5e-95 Identities = 270/317 (85%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG---CATGCCCTTCACTGGGTGTGC--CGG 61 || |||| ||| ||| ||| ||| || ||| | | |||||| |||||| | ||| Sbjct 3049 GTTCGGCTGGGTCTTACCTCTTGGTGAGCCGGTTCGTATCCTTCATTGGGTGCGGGTCGG 2990 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 ||| ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||| Sbjct 2989 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 2930 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2929 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGC 2870 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||||||| ||||| | ||||||| | | |||||||||||||| Sbjct 2869 CGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTGAAATTCT 2810 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||| | ||||||| |||||||||||||| | |||||||||||||||||||||| Sbjct 2809 TGGATTGACTGAAGACCGACTACTGCGAAAGCATCTGCCAAGGATGTTTTCATTAATCA- 2751 Query 302 TGAACGAAAGTTAGGGG 318 ||||||| |||||||| Sbjct 2750 AGAACGAAGGTTAGGGG 2734 >seq1793 Length=6624 Score = 329 bits (364), Expect = 6e-88 Identities = 265/317 (84%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGC---CCTTCACTGGGTGTGC--CGG 61 || |||| ||| ||| ||| ||| || ||| | |||||| |||||||| ||| Sbjct 6076 GTTCGGCTGGGTCTTACCTCTTGGTGAGCCGGTTTGTATCCTTCATTGGGTGTGGGTCGG 6017 Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 121 ||| ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||| Sbjct 6016 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 5957 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct 5956 CATTAGCATGGAATAATAGAATAGGACATGCGGTTCTATTTTGTTGGTTTCTAGAGTCAC 5897 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||||||| ||||| | ||||||| | | |||||| ||||||| Sbjct 5896 CGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTAAAATTCT 5837 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||| | ||||||| |||||||| ||||| | |||||||||||||||||||||| Sbjct 5836 TGGATTGACTGAAGACCGACTACTGCAAAAGCATCTGCCAAGGATGTTTTCATTAATCA- 5778 Query 302 TGAACGAAAGTTAGGGG 318 |||| || |||||||| Sbjct 5777 AGAACAAAGGTTAGGGG 5761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915118373312