Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4000 509 7e-142 seq1155 506 8e-141 seq8216 199 2e-48 seq2314 161 4e-37 >seq4000 Length=10826 Score = 509 bits (564), Expect = 7e-142 Identities = 534/694 (77%), Gaps = 42/694 (6%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | ||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 1205 TGTGATGCACTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 1146 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 1145 TCCATCTAAAGCTAAATATTGGCAAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 1086 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||||||||||||||||| || |||||||||||||||||||||| ||||| Sbjct 1085 TGAAAAGAACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGCTT 1026 Query 203 GCAACCAGACTTGCCC-GCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG- 260 | | ||| | | | ||| | ||| || | ||||| |||| | | | ||| Sbjct 1025 GAAGTCAGTCGCGTCTAGCAAG-GATCAGCC--CTTCTCGGAGGGTGTATTTCT-TGCTT 970 Query 261 GTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | | || || ||||| | | | ||| ||||||| ||||| ||||| || ||||| Sbjct 969 GACGGGTCAACATCAATTTTGACTACTGGAAAAAGGCCAGGGGAAGGTGGCACC-TTCGG 911 Query 321 GGGGTGTTATAGCCCGGGGT----------------------GGAATGCGGCCCGCCTGG 358 | | |||||||||| ||| ||||| | || |||| Sbjct 910 GTG-TGTTATAGCCTTTGGTCATATACAGTAGTTGGGATTGAGGAATTCAGCATGCCTTC 852 Query 359 A---CTGAGGTCCGCGC----TCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCC 410 | ||| ||| ||| | || ||| |||||| |||| |||||| | |||||| ||| Sbjct 851 ATGGCTGGGGTTCGCCCACATTCATGCTTAGGATGTTGGCATAATGGCTTTAAGCGACCC 792 Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAA-CCCG 469 |||||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct 791 GTCTTGAAACACGGACCAAGGAGTCTAACATACCTGCGAGTGTTTGGGTGTAAAAACCCG 732 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 |||| ||||||||||||| || || || || | | || ||| | || ||| || Sbjct 731 AGCGCATAATGAAAGTGAA---AGTTGAGACCCTTTTAAGGGGCATCGACGCCCGGACCA 675 Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 || | || || |||| || | ||||||| |||||||||||||||||||||||||| Sbjct 674 GACCTTTTGTGACGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACT 615 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| Sbjct 614 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGT 555 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| ||||||||||||||||||| Sbjct 554 GCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 521 Score = 206 bits (228), Expect = 1e-50 Identities = 132/144 (92%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 || |||| || | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 10788 GACGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 10729 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 10728 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 10669 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||||||||||||| Sbjct 10668 CGTCGAATTTGGGTATAGGGGCGA 10645 >seq1155 Length=10417 Score = 506 bits (560), Expect = 8e-141 Identities = 533/694 (77%), Gaps = 42/694 (6%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | ||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 1073 TGTGATGCACTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 1014 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 1013 TCCATCTAAAGCTAAATATTGGCAAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 954 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||||||||||||||||| || |||||||||||||||||||||| ||||| Sbjct 953 TGAAAAGAACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGCTT 894 Query 203 GCAACCAGACTTGCCC-GCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG- 260 | | ||| | | | ||| | ||| || | |||| |||| | | | ||| Sbjct 893 GAAGTCAGTCGCGTCTAGCAAG-GATCAGCCTTTC--TCGGAGGGTGTATTTCT-TGCTT 838 Query 261 GTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320 | | || || ||||| | | ||| ||||||| ||||| ||||| || ||||| Sbjct 837 GACGGGTCAACATCAATTTTGATTACTGGAAAAAGGCCAGGGGAAGGTGGCACC-TTCGG 779 Query 321 GGGGTGTTATAGCCCGGGGT----------------------GGAATGCGGCCCGCCTGG 358 | | |||||||||| ||| ||||| | || |||| Sbjct 778 GTG-TGTTATAGCCTTTGGTCATATACAGTAGTTGGGATTGAGGAATTCAGCATGCCTTC 720 Query 359 A---CTGAGGTCCGCGC----TCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCC 410 | ||| ||| ||| | || ||| |||||| |||| |||||| | |||||| ||| Sbjct 719 ATGGCTGGGGTTCGCCCACATTCATGCTTAGGATGTTGGCATAATGGCTTTAAGCGACCC 660 Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAA-CCCG 469 |||||| |||||||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct 659 GTCTTGAAACACGGACCAAGGAGTCTAACATACCTGCGAGTGTTTGGGTGTAAAAACCCG 600 Query 470 TGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCT 529 |||||||||||||||||| || || || || | | || ||| | || ||| || Sbjct 599 AGCGCGTAATGAAAGTGAA---AGTTGAGACCCTTTTAAGGGGCATCGACGCCCGGACCA 543 Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 || | || || |||| || | ||||||| |||||||||||||||||||||||||| Sbjct 542 GACCTTTTGTGACGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACT 483 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| Sbjct 482 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGT 423 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| ||||||||||||||||||| Sbjct 422 GCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 389 >seq8216 Length=632 Score = 199 bits (220), Expect = 2e-48 Identities = 132/145 (91%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 || |||| || | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 40 GACGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 99 Query 600 AGGGTGAAGCCAGAGGAAAC-TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGA 658 |||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||| Sbjct 100 AGGGTGAAGCCAGAGGAAACATCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGA 159 Query 659 TCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||||||||||||| Sbjct 160 TCGTCGAATTTGGGTATAGGGGCGA 184 >seq2314 Length=13745 Score = 161 bits (178), Expect = 4e-37 Identities = 148/189 (78%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 445 TGCGAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC 503 ||||||||||||||||| ||| |||| |||||||||||||||||| || || || || Sbjct 6 TGCGAGTGTTTGGGTGTAAAAACCCGAGCGCGTAATGAAAGTGAA---AGTTGAGACCCT 62 Query 504 GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563 | | || ||| | || ||| || || | | || |||| || | ||||||| Sbjct 63 TTTAAGGGGCATCGACGCCCGGACCAGACCTTCTGTGACGGATCTGCGGTAGAGCATGTA 122 Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTS 182 Query 624 GTGGAGGCT 632 | ||| Sbjct 183 RYKKASGCT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079808687450