Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq5806 563 2e-158 seq3514 535 1e-149 >seq5806 Length=1709 Score = 563 bits (624), Expect = 2e-158 Identities = 384/431 (89%), Gaps = 5/431 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1198 CGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 1139 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1079 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG--CGT 178 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1078 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGACCGA 1019 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 1018 AGTCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATC 959 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 || || |||||| ||||||||||| |||||||||||| ||||| |||||||||| ||| Sbjct 958 TTWCGATTTTGCACAGTGCTGTGTTYTTAATAAACAGTTGCAGCCACCTGGTATCTGCGA 899 Query 299 CCGGCATGAGCT-TACGGAGCAAGTC-CTTCACC-CTCACCGGCGCACCTTCTCCCGAAG 355 | | ||| | ||||||||| ||||||| ||| ||| |||||||||||||| Sbjct 898 CTSYCRKCWGCTCCADMGAGCAAGTCTCTTCACCGATCAAGAGCGTACCTTCTCCCGAAG 839 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 838 TTACGGTACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 779 Query 416 TACCCAACCAC 426 ||||| ||||| Sbjct 778 TACCCGACCAC 768 >seq3514 Length=3688 Score = 535 bits (592), Expect = 1e-149 Identities = 378/429 (88%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2334 CGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 2275 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2274 GTGGCCATGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 2215 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | Sbjct 2214 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCGAA 2155 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct 2154 GATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATCTT 2095 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || |||||| ||||||||||||||||||||||||| |||| |||||| || || | Sbjct 2094 GCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTCCCAGCCACCTGGTCACTGCGGCT 2035 Query 301 GGCATGAGCTTACGGAGCAAGTC-CTTCACCCTCACCG--GCGCACCTTCTCCCGAAGTT 357 || |||||| ||||||||| | ||||| | || ||| |||||||||||||||| Sbjct 2034 CCAATCAGCTTAGAGAGCAAGTCTCATCACC--AATCGGAGCGTACCTTCTCCCGAAGTT 1977 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 ||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 1976 ACGGTACGATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTA 1917 Query 418 CCCAACCAC 426 || ||||| Sbjct 1916 CCTGACCAC 1908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260687549248