Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq5806 241 3e-61 seq3514 230 5e-58 >seq5806 Length=1709 Score = 241 bits (266), Expect = 3e-61 Identities = 221/277 (80%), Gaps = 6/277 (2%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| || || Sbjct 1192 TACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 1133 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1132 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 1075 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTG--CTC 176 |||||||||||||||||||||||||||| ||||||| | | ||||||| | || Sbjct 1074 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGACCGAAGTC 1015 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 |||| | |||||||||| ||||||||||||||||| | ||||| || |||| | Sbjct 1014 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTWC 955 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 || || ||| | ||||||| || |||||||| || Sbjct 954 GATTTTGCACAGTGCTGTGTTYTTAATAAACAGTTGC 918 >seq3514 Length=3688 Score = 230 bits (254), Expect = 5e-58 Identities = 219/278 (79%), Gaps = 14/278 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| || || Sbjct 2328 TACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 2269 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | | ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2268 A--TGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 2211 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 |||||||||||||||||||||||||||| ||||||| | | ||||| | | Sbjct 2210 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-----TCCGA 2156 Query 179 ACAGATCCCC-----TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCT 233 | | | |||| |||||||||| |||||||||||| |||| | ||||| || ||| Sbjct 2155 AGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATCT 2096 Query 234 TGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 ||||| || ||| | |||||||||| ||||||||| Sbjct 2095 TGCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTC 2058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062305244544