Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1237 489 5e-136 >seq1237 Length=1541 Score = 489 bits (542), Expect = 5e-136 Identities = 414/502 (82%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGA-CCCGCACAAGCGGTGGAGCA 59 |||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||| Sbjct 1252 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGGCCCGCACAAGCGGTGGAGCA 1193 Query 60 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCT 119 ||||||||||||||| |||||||||||||||||||| | |||||||| | || | Sbjct 1192 TGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACACTTGACATACAGAGAACTTA 1133 Query 120 CTAGAGATAGAGGTTTCC--CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGT 177 | |||||| ||||| |||||||| || | ||||||| ||||||| |||||| Sbjct 1132 CNAGAGAT---GGTTTGGTGCCTTCGGGA-ACTCTGATACAGGTGCTGCATGGCTGTCGT 1077 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1076 CAGCTCGTGTTGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCCTTAGT 1017 Query 238 TGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAA-CCGGAGGAAGGT 294 ||| | || ||| | || | |||||||| |||||||||||| ||| |||||||||||| Sbjct 1016 TGCTAGCAGGTAATGCTGAGAACTCTAAGGAGACTGCCGGTGATAAAGCCGGAGGAAGGT 957 Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||||||||||| |||||||| |||||| | | ||||||||||||||||||||||| Sbjct 956 GGGGACGACGTCAAGTCATCATGGCCCTTACGTGTAGGGCTACACACGTGCTACAATGGC 897 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 ||||| || || ||||| | ||||| |||| |||| | |||||| || ||| | Sbjct 896 GCATACAGAGTGCTGCGAACCNGCGAGNGTAAGCGAATCACTTAAAGTGCGTCGTAGTCC 837 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 |||||| |||||||||||||||| |||||| ||||||||||||||||| ||||| | Sbjct 836 GGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGTATCAGAA 777 Query 475 TGCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 776 TGACGCGGTGAATACGTTCCCG 755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503865858240