Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4000 365 7e-99 seq1155 365 7e-99 seq339 104 4e-20 >seq4000 Length=10826 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2365 ACTCGCTGGACCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2424 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 2425 CCTGTTATTGCCTCAAACTTCCGTCAGCTAGACGCTGACAGTCCCTCTAAGAAGCCAGCA 2484 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | || | | || ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2485 ATCAGCAAAAGCCGAATGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 2544 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2545 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 2604 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 2605 AGAGCTATCAATCTGTC 2621 >seq1155 Length=10417 Score = 365 bits (404), Expect = 7e-99 Identities = 235/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2232 ACTCGCTGGACCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2291 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | |||||||||||||||||||| Sbjct 2292 CCTGTTATTGCCTCAAACTTCCGTCAGCTAGACGCTGACAGTCCCTCTAAGAAGCCAGCA 2351 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | || | | || ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2352 ATCAGCAAAAGCCGAATGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 2411 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 2412 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 2471 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 2472 AGAGCTATCAATCTGTC 2488 >seq339 Length=15113 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15110 ATTGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 15051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796731154239