Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3514 147 2e-33 seq5806 143 3e-32 >seq3514 Length=3688 Score = 147 bits (162), Expect = 2e-33 Identities = 123/152 (81%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | ||||||||||| Sbjct 2353 CGGGGTCTTTCCGTCTAGCCGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTG 2294 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||||||||||||||||||||||||||||| Sbjct 2293 AG-TCTCGGGTGGAGACAGCGTGGCCATGGTTACACCATTCGTGCAGGTCGGAACTTACC 2235 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 2234 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 2203 >seq5806 Length=1709 Score = 143 bits (158), Expect = 3e-32 Identities = 122/152 (80%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | ||||||||||| Sbjct 1217 CGGGGTCTTTCCGTCTAGCCGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTG 1158 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||| ||||||||||||||||||||||||| Sbjct 1157 AG-TCTCGGGTGGAGACAGCGTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACC 1099 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 1098 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547152720381