Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3955 361 1e-97 >seq3955 Length=1914 Score = 361 bits (400), Expect = 1e-97 Identities = 314/376 (84%), Gaps = 18/376 (5%) Strand=Plus/Plus Query 1 CTTTA--CAATCCGAAGACCTTCTTTCACACACG-CGGCATTGGCTGGATCAGGCTTTCG 57 ||||| ||| |||| | ||||||| |||||||| ||||| |||||| ||||||||| || Sbjct 19 CTTTAACCAACCCGAGG-CCTTCTT-CACACACGCCGGCA-TGGCTGCATCAGGCTTGCG 75 Query 58 CCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 117 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 76 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 135 Query 118 CAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACC 177 ||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct 136 CAGTGTGGCTGATCATCCTCTCAAACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACC 195 Query 178 TCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTG 237 |||||||||||||||||| || | ||| |||| | || || || |||||| |||| Sbjct 196 TCACCAACTAGCTAATCCCACTTGGGCCAATCT-AAAG-GCGAGAGCCGAAG--CCCC-- 249 Query 238 CTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTAC 297 |||| |||||| |||||||||||||| ||||||| | ||| |||||||| | Sbjct 250 CTTTGGTCCGTAGACATTATGCGGTATTAGCAGTCGTTTCCAACTGTTGTCCCCCACCTC 309 Query 298 CAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC-TCA--AGAGAAGCAAGCTTC 354 ||||| |||| | |||||||||||||||||||||||| ||| | || |||||||| | Sbjct 310 AAGGCATGTTCCCAAGCATTACTCACCCGTCCGCCGCTCGTCAGCAAAGTAGCAAGCTAC 369 Query 355 TCTC---TACCGCTCG 367 |||| ||||||||| Sbjct 370 TCTCTGTTACCGCTCG 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071904388320