Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq3955 223 7e-56 >seq3955 Length=1914 Score = 223 bits (246), Expect = 7e-56 Identities = 232/304 (76%), Gaps = 9/304 (3%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 53 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 112 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| ||||||| || |||| ||| Sbjct 113 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAAACCAGCTAGGGAT 172 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||||| |||||| | | ||| |||| Sbjct 173 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACTTGGGCCAATCTAAAG 232 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||| | | | ||| | ||| ||||||||||||||||||| || Sbjct 233 GCGAGA--------GCCGAAGCCCCCTTTGGTCCGTAGACATTATGCGGTATTAGCAGTC 284 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||| | || | | |||||| ||| | || | |||||||||||||||| Sbjct 285 GTTTCCAACTGTTGTCCCCCACCTCAAGGCATGTT-CCCAAGCATTACTCACCCGTCCGC 343 Query 301 CACT 304 | || Sbjct 344 CGCT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998310952704