Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1237 178 1e-42 >seq1237 Length=1541 Score = 178 bits (196), Expect = 1e-42 Identities = 137/162 (85%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| |||||| | |||| ||| | ||||| Sbjct 816 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTAAGTGATTCGCTTACNCTCGCN 875 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || || ||||||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 876 GGTTCGCAGCACTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACACGTAAGGGCCA 935 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGG-TTTGTCAC 161 ||| ||||||||||| ||||||||||||||||| ||| |||| Sbjct 936 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGCTTTATCAC 977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415964056430