Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq3514 149 4e-34 seq5806 129 4e-28 >seq3514 Length=3688 Score = 149 bits (164), Expect = 4e-34 Identities = 117/140 (84%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 2726 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTA 2667 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| | |||| ||| | ||||| ||||| Sbjct 2666 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTCTACCATTACACTAA 2607 Query 121 CACTACGATTTCCGACCGTA 140 | |||||| |||||||||| Sbjct 2606 CCGTACGATGTCCGACCGTA 2587 >seq5806 Length=1709 Score = 129 bits (142), Expect = 4e-28 Identities = 115/141 (82%), Gaps = 5/141 (4%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||| ||||||||||||||||||||||||| || | |||||||||||||| |||| Sbjct 1588 TACCTTT-ATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAGAACCTA 1530 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| |||||||| ||| ||| |||||| | Sbjct 1529 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTCAAGCACCCTTATGCTCTTGCAC--T 1472 Query 121 CACT--ACGATTTCCGACCGT 139 || | ||||||||| ||||| Sbjct 1471 CAATGCACGATTTCCAACCGT 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351970567300