Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4000 230 2e-58 seq1155 230 2e-58 seq1793 217 2e-54 >seq4000 Length=10826 Score = 230 bits (254), Expect = 2e-58 Identities = 164/187 (88%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 3122 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 3063 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 3062 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 3004 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | ||||||| | | | ||||||||||| Sbjct 3003 CCGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTGAAATTC 2944 Query 181 TTGGATT 187 ||||||| Sbjct 2943 TTGGATT 2937 >seq1155 Length=10417 Score = 230 bits (254), Expect = 2e-58 Identities = 164/187 (88%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 2989 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 2930 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 2929 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 2871 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | ||||||| | | | ||||||||||| Sbjct 2870 CCGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTGAAATTC 2811 Query 181 TTGGATT 187 ||||||| Sbjct 2810 TTGGATT 2804 >seq1793 Length=6624 Score = 217 bits (240), Expect = 2e-54 Identities = 161/187 (86%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 6016 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATA 5957 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| |||||||||||||||| |||||||| || Sbjct 5956 CATTAGCATGGAATAATAGAATAGGACATGCGGTTCTATTTTGTTGGTTTCTA-GAGTCA 5898 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | ||||||| | | | |||| |||||| Sbjct 5897 CCGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTCAGTCGCTAGAGGTAAAATTC 5838 Query 181 TTGGATT 187 ||||||| Sbjct 5837 TTGGATT 5831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511955761760