Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq3514 196 5e-48 seq5806 165 8e-39 >seq3514 Length=3688 Score = 196 bits (216), Expect = 5e-48 Identities = 137/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 2714 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 2655 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| |||| | ||||| |||||||| |||||||| Sbjct 2654 CTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTCTACCATTACACTAACCGTACGATGTC 2595 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| |||||||||||||||||||| Sbjct 2594 CGACCGTACTTAGCCAACCTTCGTGCTCCTCCGTTA 2559 >seq5806 Length=1709 Score = 165 bits (182), Expect = 8e-39 Identities = 130/156 (83%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||| Sbjct 1577 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAGAACCTACTTTCGTACCTG 1518 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| |||||||||||||| ||||||| ||||||| | |||||| || Sbjct 1517 CTCGACGTGTCTGTCTCGCAGTCAAGCACCCTTATGCTCTTGCACTCAATGCACGATTTC 1458 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||||| | || |||||||||||||||||||| Sbjct 1457 CAACCGTGCTGAGGGTACCTTCGTGCTCCTCCGTTA 1422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473559079628