Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq3955 477 2e-132 >seq3955 Length=1914 Score = 477 bits (528), Expect = 2e-132 Identities = 357/414 (86%), Gaps = 10/414 (2%) Strand=Plus/Plus Query 4 CTTTA--CAACCCGAAGGCCTTCTTCATACACGC-GGCATGGCTGCATCAGGCTTGCGCC 60 ||||| |||||||| ||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 19 CTTTAACCAACCCGA-GGCCTTCTTCACACACGCCGGCATGGCTGCATCAGGCTTGCGCC 77 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 78 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 137 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||||||| ||||||||||| ||||||||||||||||||||| |||| ||||||||| | Sbjct 138 GTGTGGCTGATCATCCTCTCAAACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTC 197 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||||||||||||| |||| ||| | | ||||| |||||| ||| || Sbjct 198 ACCAACTAGCTAATCCCACTTGGGCCAATCTAAAGGCGAGAG--CCGAAG----CCCCCT 251 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 |||||| ||| ||||||||||||||| |||||||| ||| |||||| || | Sbjct 252 TTGGTCCGTAGACATTATGCGGTATTAGCAGTCGTTTCCAACTGTTGTCCCCCACCTCAA 311 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 |||| |||||| ||||||||||||||||||| ||||||||| ||| |||||||| || Sbjct 312 GGCATGTTCCCAAGCATTACTCACCCGTCCGCCGCTCGTCAGCAAAGTAGCAAGCTACTC 371 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 TCTGTTACCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222290974144