Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4000 412 7e-113 seq1155 408 8e-112 >seq4000 Length=10826 Score = 412 bits (456), Expect = 7e-113 Identities = 278/310 (90%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||||| || | | || |||||||||| Sbjct 2530 GAACGAGACCTTAACCTGCTAAATAGCCCATTCGGCTTTTGCTGATTGCTGGCTTCTTAG 2471 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 2470 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2411 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| ||| |||||| | |||||||| Sbjct 2410 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGTCCAGCGAGTTTTTTTCCTTGGCC 2351 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 2350 GGAAGGTCCGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 2291 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 2290 GCTCTTCAACGAGGAATACCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 2231 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2230 GCCCTTTGTA 2221 >seq1155 Length=10417 Score = 408 bits (452), Expect = 8e-112 Identities = 278/310 (90%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||||| || | | || |||||||||| Sbjct 2397 GAACGAGACCTTAACCTGCTAAATAGCCCATTCGGCTTTTGCTGATTGCTGGCTTCTTAG 2338 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 2337 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2278 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||||| ||| |||||| | |||||||| Sbjct 2277 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGGTCCAGCGAGTTTTTT-CCTTGGCC 2219 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 2218 GGAAGGTCCGGGTAATCTTGTGAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 2159 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 2158 GCTCTTCAACGAGGAATACCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 2099 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2098 GCCCTTTGTA 2089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947115519232