Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2640 237 1e-57 seq1717 233 2e-56 seq1739 134 1e-26 seq2085 131 1e-25 >seq2640 Length=24278 Score = 237 bits (262), Expect = 1e-57 Identities = 400/572 (70%), Gaps = 13/572 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||| || ||||| |||||||| |||||||| | |||||| | || | Sbjct 17053 ATCTGGCAAATGTATAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTC 17112 Query 61147 TCCAAAGACATGAATGACTGG--GAGC--GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 || || ||| || | |||||| || | | | | || | |||| || || || Sbjct 17113 TCTAAGGACCTGCACGACTGGACGAACAAGATGAATGA-CAACGAACGTCACTTTATCTC 17171 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || |||| ||||| || ||||||||||||||||| |||||||| | | || || Sbjct 17172 TCACGTCCTGGCTTTCTTCGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTTGAGCG 17231 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | || || |||| ||||||| ||||| |||||||| |||||||| || Sbjct 17232 TTTCTCCAACGAAGTTCAAGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 17291 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||||||||| ||||| |||| | || Sbjct 17292 GGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCCGC 17351 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || ||| ||| ||||| |||| ||||||| || || | ||||| || || || Sbjct 17352 CGAGCGTACCCGACTGTTCGATGCTGTCGAGACTATTCCATGCATCAAGCGTAAGGCCGA 17411 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCA 61500 |||||| | || ||||| || |||| | | || |||| || || | | || Sbjct 17412 TTGGGCACTGAAGTGGATTTCC--GACAAGCAGTCAACCTTTGCCGAGCGTCTAGTTGCC 17469 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | || |||||| | || ||| ||| || || || || ||||| ||| |||| Sbjct 17470 TTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGCTCCTTCGCTGCTATCTTCTGGATGAAA 17529 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA--CGCGACGAGG 61618 || ||||| |||||||||||||| |||||| ||| || | ||||| || || || | Sbjct 17530 AAGCGTGGTCTTATGCCCGGTCTTACCTTCTCCAACGAACT--TATCAGCCGTGATGAAG 17587 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTC 61650 ||||||| || |||||| ||||| ||| Sbjct 17588 GCATGCACACCGACTTTGCTTGCTTGCTCTTC 17619 >seq1717 Length=72410 Score = 233 bits (258), Expect = 2e-56 Identities = 397/570 (70%), Gaps = 9/570 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| |||||||| |||||||| | || ||| | || | Sbjct 62330 ATCTGGCAAATGTACAAAAAGGCCGAAGCTTCTTTCTGGACTGCCGAAGAGATGGACCTC 62389 Query 61147 TCCAAAGACATGAATGACTGG--GAGC--GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 || || || || | |||||| || | | | | || | || | ||||| || Sbjct 62390 TCTAAGGATCTGCACGACTGGACGAACAGGATGAATGA-CAACGAGCGTCATTTTATCTC 62448 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || |||| |||||||| ||||||||||||||||| |||||||| | | || || Sbjct 62449 CCACGTTCTGGCTTTCTTTGCTGCTTCGGACGGTATCGTAAATGAGAACCTCGTAGAGCG 62508 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | || || || | ||||||| ||||| |||||||| |||||||| || Sbjct 62509 TTTCTCCAACGAAGTTCAGGCAGCGGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGAT 62568 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | ||||||||||| ||||| |||| | || Sbjct 62569 GGAGAACATCCACTCAGAGACATACTCGCTACTCATCGATACATACATTCGGGACCCCGC 62628 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || ||| ||| ||||| |||| ||||||| || || | || || || ||||| Sbjct 62629 CGAGCGTACCCGACTGTTCGATGCTGTCGAGACTATTCCATGCATCAAACGTAAGGCGGA 62688 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCA 61500 |||||| | || ||||| || |||| | || |||| || || || | || Sbjct 62689 TTGGGCACTGAAGTGGATTTCC--GACAAGCAATCGACCTTTGCCGAGCGTCTGGTTGCC 62746 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | || |||||| | || ||| ||| || || || || ||||| ||| ||||| Sbjct 62747 TTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTCGCTGCCATCTTCTGGATGAAG 62806 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || ||||| || ||||| ||||| || ||| ||| ||| | || || || |||||| Sbjct 62807 AAGCGTGGCCTCATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGCCGTGATGAGGGC 62866 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTC 61650 ||||| || |||||| ||||| ||| Sbjct 62867 ATGCACACCGACTTTGCTTGCTTGCTCTTC 62896 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| |||||||| || ||||||||||| | || |||| || || || ||| Sbjct 63031 GACGCATTGCCCGTTAGCCTTATCGGCATGAACGCCGATCTGATGTGCCAATACATCGAA 63090 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGAT-CTATAATACGAAAAA 61856 || ||||| |||||||| | || | |||||| | | || ||| || | | || Sbjct 63091 TTCGTTGCTGACCGTCTACTCATCTCTCTGGGTAACGA-CAAATACTACAACTCAACCAA 63149 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 ||| || || |||||||||||||||||||| | |||||||| || || |||||||| || Sbjct 63150 CCCCTTCGACTTCATGGACATGATTTCGCTTCAAGGCAAGACAAACTTCTTCGAGAAGCG 63209 Query 61917 TGT 61919 || Sbjct 63210 CGT 63212 >seq1739 Length=117728 Score = 134 bits (148), Expect = 1e-26 Identities = 137/176 (78%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 66340 CATA-AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG---TTGCTCCT 66395 |||| || |||||| |||||||| || ||||| | ||| || || || |||||||| Sbjct 52173 CATACAAGAGATCACAGATCCAGAGAGCATAGAACAAATCACGGGCACGCAGTTGCTCCT 52232 Query 66396 CAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCA 66455 |||||||||| || | || ||||||||||||||||||||| | |||||||| || | Sbjct 52233 ---TGCCGTGATTCTTCCTCAGGTCGAGGAACTCAAAGATGTCATCGTGCCATGGCTCGA 52289 Query 66456 GGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 ||||||| || |||| || |||||| |||||| ||||||||||| |||||| Sbjct 52290 GGTAGATAGCAAACGCTCCGGGACGTTTATTGCCACCCTGGTCGACGTAACGAGCG 52345 Score = 109 bits (120), Expect = 4e-19 Identities = 174/246 (71%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646 || || ||| ||| | ||| | |||||||||||| || ||||| ||| ||||||| Sbjct 52472 GCACGAATACAGTGGATATTAATACCAATACCACCCGCAGTCTTACTGATCATAGCACAA 52531 Query 66647 -TCG-GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || | | | || | | ||||| || || ||||| | || ||| || |||| ||| Sbjct 52532 CTCTTGAGAGTATC--GTAGATGCCCTCGATCGAGTCGTCTTTCATGCACACGAGGAAGC 52589 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 | |||||||||||||| ||||| || |||| ||| || || |||| ||| ||||| | Sbjct 52590 ACGAACTAAGTTGGGGGTTGGGGGTACCGGCGTTGAACAGTGTAGGTGAAGCATGCGTGA 52649 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 |||| | ||||| |||||| ||||||||||| || || | |||||||| | Sbjct 52650 AGTAGCGCTCGGACATTAGATTGTATGTCTCGATGACGCGCTCGATATCCTCGCCATGGA 52709 Query 66825 TCCCGA 66830 | |||| Sbjct 52710 TGCCGA 52715 >seq2085 Length=44481 Score = 131 bits (144), Expect = 1e-25 Identities = 133/172 (77%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 66340 CATA-AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAA 66398 |||| || ||||||| |||||||| || ||||| | ||| || || ||| | | ||| Sbjct 23607 CATACAAGAGATCAGAGATCCAGAGAGCATAGAACAAATCACGGGCACGTAGTTGCTCTT 23666 Query 66399 TGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 |||| ||||| || | ||||||||||||||| |||||||| | |||||||| || |||| Sbjct 23667 TGCCATGATTCTTCCTCAAGTCGAGGAACTCGAAGATGTCATCGTGCCATGGCTCAAGGT 23726 Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 |||| || |||| || ||| ||| ||| || ||||||||||| ||||| Sbjct 23727 AGATAGCAAACGCTCCGGGACGCTTGTTGCCGCCCTGGTCGACGTAACGAGC 23778 Score = 96.9 bits (106), Expect = 3e-15 Identities = 225/337 (67%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646 || || ||| ||| | ||| | |||||||||||| || ||||| || ||||||| Sbjct 23903 GCACGAATACAGTGGATATTAATACCAATACCACCCGCAGTCTTACTAATCATAGCACAA 23962 Query 66647 TCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCAT 66706 | || | | ||||| || || ||||| | || || || |||| ||||| Sbjct 23963 CTCTTGAGGGTATCGTAGATGCCCTCGATTGAGTCGTCTTTCATACACACGAGGAAGCAT 24022 Query 66707 GAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 ||||| || ||||| || ||||| |||| ||| | || |||| ||| ||||| ||| Sbjct 24023 GAACTGAGCTGGGGGTTTGGTGTACCGGCGTTGAATAATGTAGGTGAAGCATGCGTGAAG 24082 Query 66767 TAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATC 66826 || | ||||| | ||||| ||||||||||| || || | |||||||| || Sbjct 24083 TAGCGCTCGGACATTAAGTTGTATGTCTCGATGACGCGCTCGATATCCTCGCCATGGATG 24142 Query 66827 CCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATG 66885 |||| | ||| ||||| | | || || || || || | | || | |||| | | Sbjct 24143 CCGACAGAGACA-CGCATGATCATGTGCTGGGGGCGCTCTGCAACTCGGCCATTGAGACG 24201 Query 66886 CATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 | | ||| |||||||| || || |||| |||||| Sbjct 24202 AAGGAGGTATGAGCGTTCAAGTGTTTTGAATCCAAAG 24238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397524784234160