Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Athelia_20rolfsii_20[genbank_20GCA_5F000961905.2_202017-07-24] 8,919 sequences; 72,332,728 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1977 102 3e-16 seq1603 95.1 5e-14 >seq1977 Length=76175 Score = 102 bits (112), Expect = 3e-16 Identities = 113/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| |||||||||||||| || | | | ||||||||||||| || ||||| || || Sbjct 24725 ACCAATCGTCATACGAGAGGGGATAGCGTGCGGGTTGATGATGAGATCCGGCACGATACC 24666 Query 364483 GTCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 || || || |||||||| ||||| || || | | | | |||||| || ||||| || Sbjct 24665 CTCCGCCGTGAAGGGCATGTCTTCCTGGCGGTAGG-TAATACCAATCGTACCCTTCTGAC 24607 Query 364542 CATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | || || |||||||||||||| || Sbjct 24606 CGTGTCGCGAGGCAAACTTGTCGCCGAT 24579 >seq1603 Length=129623 Score = 95.1 bits (104), Expect = 5e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| |||||||||||||| || | | | ||||||||||| | || ||||| || || Sbjct 108946 ACCAATCGTCATACGAGAGGGGATAGCGTGCGGGTTGATGATAAGATCCGGCACGATACC 109005 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || |||||||| ||||| | || | | |||||| || ||||| || | Sbjct 109006 TTCCGCCGTGAAGGGCATGTCTTCCTGGCGATAAGTAATACCAATCGTACCCTTCTGACC 109065 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || |||||||||||||| || Sbjct 109066 GTGTCGCGAGGCAAACTTGTCGCCGAT 109092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884671005195667