Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq189 560 4e-157 >seq189 Length=24726 Score = 560 bits (620), Expect = 4e-157 Identities = 542/691 (78%), Gaps = 34/691 (5%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | ||||| | ||||||||||||||||||||||||||| ||| ||| ||||||| Sbjct 4333 TGTGATACACCTTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAACGGGTGGTAAAT 4274 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | |||||||||||||| ||| |||||||||||||| ||||||| |||| |||||| Sbjct 4273 TCCATCTAAAGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 4214 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||||||||||||||||| || |||||||||||||||||||||| ||||| Sbjct 4213 TGAAAAGAACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGCTT 4154 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | | ||| | | ||| || |||| || | | | |||||||| ||||||| Sbjct 4153 GAAGTCAGTCGCGTCCGTAGGGACTCAGCCTTGCTTTTGCTTGGTGCACTTCTCTGCGGA 4094 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGG 322 | |||||||||| | || | |||| || ||| |||||||||| | || | Sbjct 4093 CGGGCCAGCATCGATTTTGGTCGCCGGAAAAGGGCGGGAGGAATGTGGCAGCTTTTAGCT 4034 Query 323 GGTGTTATAGCCC-------------------GGGGT---GGAATGCGGCCCGCCT--GG 358 | |||||||||| ||| | ||| ||| || ||||| || Sbjct 4033 G-TGTTATAGCCTTTCGTCGTACACGGTGGCTGGGATCGAGGACTGCAGCACGCCTTTGG 3975 Query 359 ACTGAGGTC---CGCGCTCCG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTC 413 | | | || | ||| || ||| |||||||||||||||||| | ||| || |||||| Sbjct 3974 TCGGGGTTCGCCCACGCCACGTGCTTAGGATGCTGGCGTAATGGCTTTAAACGACCCGTC 3915 Query 414 TTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCG 473 ||| |||||||||||||||||||||||| |||||||||||||||| |||||| ||| Sbjct 3914 TTGAAACACGGACCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGCAAAACCCAGGCG 3855 Query 474 CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTG-CACCATCGACCGATCCTGAT 532 ||||||||||||||| || ||||| | | | || | | |||| || |||| ||||| Sbjct 3854 CGTAATGAAAGTGAAA--AGTTGGGA-CTCTTTAGTGAGGCACCGACGCCCGAACCTGAA 3798 Query 533 GTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATG 592 |||||| || || |||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 3797 GTCTTCTGACGGTTTTGAGGCAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATG 3738 Query 593 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCA 652 |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| Sbjct 3737 CCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCA 3678 Query 653 AATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||||||||||| Sbjct 3677 AATCGATCGTCAAATTTGGGTATAGGGGCGA 3647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079988545700