Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq133 100 9e-19 >seq133 Length=40681 Score = 100 bits (110), Expect = 9e-19 Identities = 230/337 (68%), Gaps = 26/337 (8%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTC-GTGAGATGTTGGGTTAAGTCCCGCAA 214 ||||||| ||||||| ||||| ||||||||||| |||||| || |||||| ||| || Sbjct 29192 ACAGGTGTTGCATGGCTGTCGCCAGCTCGTGTCAGTGAGACGTATGGTTAATTCCGTTAA 29133 Query 215 -CGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCC 273 ||||||||| ||| ||||| |||| | | || || | | Sbjct 29132 ACGAGCGCAATCCTC----------GCCATGATTATAAAG---ATTCATGGTCTCATTC- 29087 Query 274 GGTGACAAACCGGAGGAAGGTGGG--GACGACGTCAAATCATCATGCCCCTTATGATTTG 331 ||| ||| | | || | || ||| | | ||| | ||||| |||||||| | || Sbjct 29086 --TGATAAA--GAATGATTTTAGGAGGACTATGACAAGCCCTCATGGCCCTTATGGTGTG 29031 Query 332 GGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 ||||| | ||||||||||| | | | | |||| | | || | | || || | ||| | Sbjct 29030 GGCTATAGACGTGCTACAA-GAAGACTGACAATGTGTTGCAATATCGAAAGATGGAGCCA 28972 Query 391 ATCCCATAAAGT-TGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGG 449 ||| | |||| | || | | | || |||||| ||| |||||| || ||||||| || Sbjct 28971 ATCACCTAAAAAGTCTTATTA-TACGAATTGTATGCTGGAACTCGCGTACATGAAGCAGG 28913 Query 450 AATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAA 486 ||| | ||||||||||||||| || ||||||||||| Sbjct 28912 AATTCCGAGTAATCGTAGATCACCACGCTACGGTGAA 28876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503991968640