Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq189 470 3e-130 >seq189 Length=24726 Score = 470 bits (520), Expect = 3e-130 Identities = 291/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| Sbjct 5573 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTCGGCTGGTCGCCGGCTTCTTAG 5514 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5513 AGGGACTATCAGCGTCTAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 5454 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct 5453 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTAACCTTGGCC 5394 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5393 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 5334 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||| ||| | ||||||||| ||||| |||||||||||| Sbjct 5333 GCTCTTCAACGAGGAATTCCTAGTAGGCGTGAGTCATCAGCTCGCGTCGATTACGTCCCT 5274 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 5273 GCCCTTTGTA 5264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947194941952