Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq189 728 0.0 seq519 77.0 1e-11 >seq189 Length=24726 Score = 728 bits (806), Expect = 0.0 Identities = 468/507 (92%), Gaps = 3/507 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| Sbjct 547 GTACTCATTCCAATTATAAGACCCAAAAGAGCCCTATATTGTTATTTATTGTCACTACCT 606 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 666 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 667 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 726 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 727 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCG 786 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||| |||||||||||| |||| || ||||| Sbjct 787 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCAAAGAGCGGTTGCCCGCATTGGT 846 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| Sbjct 847 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCGGCATGTATTAGCTCT 906 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||| Sbjct 907 AGAATTACCACAGTTATCCATGTAGCAAGGTACCGTCAAATAAACTATAACTGATTTAAT 966 Query 419 GAGCCATTCGCAGTTTCACTGTATAGAT-TGCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||||||||||||||| |||| || | |||||||||||||||||||||||||||| Sbjct 967 GAGCCATTCGCAGTTTCACAGTATGAATCCGTTTATACTTAGACATGCATGGCTTAATCT 1026 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 1027 TTGAGACAAGCATATGACTACTGGCAG 1053 >seq519 Length=153665 Score = 77.0 bits (84), Expect = 1e-11 Identities = 46/47 (98%), Gaps = 1/47 (2%) Strand=Plus/Plus Query 68 TCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTA 114 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 70573 TCGGG-TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTA 70618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391934464