Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq101 197 1e-45 seq379 168 5e-37 seq124 165 6e-36 >seq101 Length=461416 Score = 197 bits (218), Expect = 1e-45 Identities = 413/611 (68%), Gaps = 7/611 (1%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| ||||||| |||| ||| | |||||||| || ||||||| ||| | Sbjct 403628 CAGGGAGAACATCCACTCCGAGACATACTCCTTGCTCATCGACACCTACATCAAGGACCC 403687 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 |||| || || | | ||| ||||||||||||| || ||| | ||||| || || Sbjct 403688 GGCGCGCCGCGAGCACCTCTTCGATGCCATCGAGACCATCCCGTGCATCAAGCGCAAGGC 403747 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCTG 61497 || ||||| | ||||| || |||| | || || || || || || | | Sbjct 403748 CGAGTGGGCGCTGCGCTGGATATCCG--ACAAGGACTCGACTTTCGGCGAGCGCCTCATC 403805 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | |||||||| | || ||||| || || || || | ||||| ||| | Sbjct 403806 GCCTTCGCCGCCGTCGAGGGCATTTTCTTCAGCGGCTCCTTCGCGTCCATCTTCTGGCTC 403865 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || ||||| || || |||||| ||| ||| | || || ||||||||| Sbjct 403866 AAGAAGCGCGGCCTGATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAG 403925 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 |||||||| || || || ||||| ||| ||| |||| || || ||| Sbjct 403926 GGCATGCACACCGACTTCGCCTGCTTGCTCTTC--TCGC-ATCTCCGCAAACGCCCGCAC 403982 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 || || | ||| | ||||| || | ||||| ||||| || || || Sbjct 403983 CCCGACACCGTCCGCACGATCATCACGGAGGCCGTGAAGATCGAGCAGGAGTTCCTCACC 404042 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| | |||||||| |||||||||||||| | | | ||| |||||||| || Sbjct 404043 GACGCGCTCCCCGTCTCGCTCATCGGCATGAACTCGAAATTGATGAACCAGTATATCGAG 404102 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || |||||||| ||| | |||| | || | || | ||| || || || Sbjct 404103 TTCGTCGCCGACCGCCTGCTCGTCGCGCTCGGCAACGAGAAGCACTACAACTCGTCGAAT 404162 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||||||||| |||||| | ||||||||||| || |||||||| || Sbjct 404163 CCCTTCGACTTCATGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGC 404222 Query 61918 GTAGGCGACTA 61928 || |||||| Sbjct 404223 GTCTCCGACTA 404233 Score = 104 bits (114), Expect = 2e-17 Identities = 154/214 (72%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 61108 GCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG 61167 || || ||||| |||||||| | ||| ||| | || ||||||| ||| | | |||||| Sbjct 403345 GCCGAGGCTTCATTCTGGACCGCGGAAGAGATGGACCTGTCCAAGGACGCGCACGACTGG 403404 Query 61168 GAGCGT----TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223 ||| | | ||| | || | |||||||| ||| | | |||||||| || Sbjct 403405 GAGAACAAACTCAACGA-CAACGAGCGCCATTTCATCTCCCATATCCTCGCGTTCTTCGC 403463 Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGT 61283 ||| || ||||| |||||||| ||||| | | || |||||| || | ||||| || || Sbjct 403464 CGCGTCCGACGGCATCGTCAACGAGAACCTCGTCGAGCGTTTCTCGAACGAGGTTCA-GT 403522 Query 61284 GT-CGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 | | |||||||| ||||||||||||||||| || Sbjct 403523 GCGCAGAGGCGCGCTGTTTCTACGGCTTCCAAAT 403556 >seq379 Length=286460 Score = 168 bits (186), Expect = 5e-37 Identities = 403/606 (67%), Gaps = 5/606 (1%) Strand=Plus/Plus Query 66337 ACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTC 66396 ||||| ||| ||||| || |||||||| || |||||||| ||||| || || |||||| Sbjct 219906 ACGCACAAA-AGATCGGGAATCCAGAGCGCATAGAAGAGGTCGCGCGCGCGGACCTCCTC 219964 Query 66397 AATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456 ||||||| || ||||||| ||||||||| || || | ||| |||||||| || || | Sbjct 219965 TTTGCCGTGGTTCTTGCGCAGGTCGAGGAAGTCGAACACGTCCGCATGCCACGGCTCGAT 220024 Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516 ||| || ||||||| ||| ||| ||| || || |||||||| ||||| || Sbjct 220025 GTAAATCGCGAACGCGCCGGGACGCTTGTTACCGCCCTGGTCGACATAGCGCGCCGTCGA 220084 Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576 || | | | |||| ||| || |||| ||||| | ||| || ||||| ||||| Sbjct 220085 GTCGTACGCGCGCAGCATGGGCACGATGCCGTTGCTGTGGCCGTTCGTGCCCGCGATGTA 220144 Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 || || || || || ||| | || || || || || ||||||||||| ||| Sbjct 220145 CGAGCCCTTCGCGCGAATGCAGTGGATGTTGAGGCCGATGCCGCCGGCCGTCTTGCTGAT 220204 Query 66637 GGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC 66694 || | | || | | || | | ||||| || || ||||| |||| || || Sbjct 220205 --CATCGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCCTCCTTCATCGTG 220262 Query 66695 AGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTA 66754 | ||| |||| || || || || | || ||| |||| |||||| || || | | Sbjct 220263 ACAAGGAAGCAGCTGCTCAGCTGCGGATGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAA 220322 Query 66755 GCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTT 66814 |||||||| ||||| | ||||| |||||||||||||| | || | || Sbjct 220323 GCGTGCGTGAAGTAGCGCTCGGACATCAGGTTGTACGTCTCGATCGCGCGCTCGACGTCC 220382 Query 66815 TCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGA 66874 |||| || || || | || ||||| || | || || ||||| ||| | | || Sbjct 220383 GCGCCGTGGATGCCCACCGCCACGCGCATGAGCATGTGCTGCGGCCGCTCGGCAACGCGG 220442 Query 66875 TCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTG 66934 | || || ||| | || ||||| || || ||||||| || ||||| ||| | | Sbjct 220443 CCGTTAATCCGCAGGAGATACGAGCGCTCGAGCGTCTTGAAGCCGAAGTATTGGTAGTGG 220502 Query 66935 AAATCG 66940 || ||| Sbjct 220503 AAGTCG 220508 Score = 167 bits (184), Expect = 2e-36 Identities = 214/293 (73%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| ||||| || || |||||||| |||||||| || || || || || ||| || | Sbjct 264992 CATGAATAGGTCGGGAATCCAGAGCGCGTAGAACAGGTCCCGCGCGCGGACCTCTTCCTT 264933 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||| || ||||||| ||||||||| || |||||||| | ||||| || || ||||| Sbjct 264932 GCCGTGGTTCTTGCGCAGGTCGAGGAATTCGAAGATGTCCGGGTGCCACGGCTCGAGGTA 264873 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG-- 66517 |||||| |||| |||| || ||| ||| |||||||| ||||||| ||| | | | Sbjct 264872 GATGGCAAACGCGCCCGGGCGCTTGTTGCCGCCTTGGTCCACGTAGC--GCGCCGTCGAA 264815 Query 66518 TTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGG 66577 | ||| | |||| ||| || ||||||||||| || ||| || ||||| ||||| Sbjct 264814 TCGAACGCGCGCAGCATGGGCACGAGCCCGTTCGACACGCCGTTCGTGCCCGCGATGTAC 264755 Query 66578 GATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 || || || || || | ||||| || || |||||||| || || |||| Sbjct 264754 GAGCCCTTGGCGCGGATGTTGTGAATGTTAAGGCCAATACCGCCCGCACTCTT 264702 >seq124 Length=448922 Score = 165 bits (182), Expect = 6e-36 Identities = 408/613 (67%), Gaps = 11/613 (2%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| ||||||| |||| ||| | |||||||| || ||||||| ||| | Sbjct 288810 CAGGGAGAACATCCACTCCGAGACATACTCACTCCTCATCGACACCTACATCAAGGACCA 288869 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 |||| || || | |||| | ||||||||||| || || | ||||| || || Sbjct 288870 GGCGCGCCGCGAGCACCTGTTTGACGCCATCGAGACTATCCCATGCATCAAGCGCAAGGC 288929 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCTG 61497 || ||||| | |||||| | | |||| | || ||||| || || || | | Sbjct 288930 CGAGTGGGCACTGCGCTGGATCTC--GGACAAGGACTCGACATTCGGCGAGCGCCTCATT 288987 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || || || | || || || | || ||||| || || || || ||||| ||| | Sbjct 288988 GCCTTCGCCGCCGTTGAAGGCATTTTCTTCAGCGGCTCCTTCGCGAGCATCTTCTGGCTC 289047 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || |||||||| ||||| ||| ||| ||| | || || ||||||||| Sbjct 289048 AAGAAGCGAGGCCTCATGCCCGGCCTGACGTTCTCCAACGAGCTCATCTCGCGCGACGAG 289107 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTC--CGT 61675 |||||||| || ||||| |||| ||| ||| | || || || | | | Sbjct 289108 GGCATGCACACCGACTTTGCGTGCCTGCTCTTC--TCGC-ACCTCCGCAAGCGCCCACAT 289164 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | | ||| | | ||| | || || || | ||||| ||||| || || | Sbjct 289165 CCCGACACCGTCCGCAT--GATCATCACAGAAGCTGTGAAGATCGAGCAGGAGTTCCTCA 289222 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | ||||| | |||||||| |||||||||||||| | || ||| ||||| || | Sbjct 289223 CGGACGCGCTCCCCGTCTCCCTCATCGGCATGAACTCGAAGCTGATGAACCAGTACATCG 289282 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || || ||||| || | |||| | || | || | ||| || || | Sbjct 289283 AGTTCGTCGCGGACCGCCTCCTCGTCGCACTCGGCAACGAGAAGCACTACAACTCGTCGA 289342 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 | || || || |||||||||||||| |||||| | ||||||||||| || |||||||| | Sbjct 289343 ATCCCTTCGACTTCATGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGC 289402 Query 61916 GTGTAGGCGACTA 61928 | || |||||| Sbjct 289403 GCGTGTCCGACTA 289415 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 ||||| || ||||| || ||||| |||||||||||||| | | || |||||| || | Sbjct 288637 GCGTTTTTCGCCGCGTCCGACGGCATCGTCAATGAGAACCTCGTCGAGCGTTTCTCGAAC 288696 Query 61273 GAGGTGCAAGTGT-CGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||||||| ||||| | |||||||| || ||||| |||||||| || Sbjct 288697 GAGGTGC-AGTGTGCAGAGGCGCGCTGCTTCTATGGCTTCCAAAT 288740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565412577760