Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auricularia_20auricula-judae_20[genbank_20GCA_5F002092955.1_202017- 04-17] 534 sequences; 43,569,032 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq124 114 2e-20 >seq124 Length=448922 Score = 114 bits (126), Expect = 2e-20 Identities = 217/312 (70%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 162496 GAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAA 162555 ||||| || ||| || || || || | || || || || || || || || || || Sbjct 102487 GAGACGCCGCAGTCGGAGACGACGCCGTTCTACCCGCGCTCGCCGTACGGCGTCGCCAAG 102428 Query 162556 CTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGC 162615 | |||| ||||||||||| | |||||| | || ||| |||| | |||| | | Sbjct 102427 ATGTATGCGTTCTGGATCACCGTCAACTACCGCGAGGCCTACAACATGTACGCCTGCAAC 102368 Query 162616 GGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATC 162675 || || || ||||| ||||| ||| | ||| | || || |||||||| ||||||||| Sbjct 102367 GGCATCCTCTTCAACCACGAGAGCCCGCGCCGCGGCCGCACCTTCGTCACCCGCAAGATC 102308 Query 162676 GTCCGAGCCTTGTC-CCGA-ATTAGTGT-GGGACTCCAAAGTG-ATCTACAACTTGGAAA 162731 ||| ||| ||| |||| || || | || | | ||||| ||||| || || || Sbjct 102307 ACCCGCGCC--GTCGCCGACATCAGCCTCGGCAAGCAGAAGTGCCTCTAC--CTCGGCAA 102252 Query 162732 CCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGAT 162791 |||| | || || |||||||| |||||||| |||||||| |||| |||||| || Sbjct 102251 CCTCGACGCGAAGCGCGACTGGGGCCACGCCAAGGACTACGTTGAGGGCATGTGGCGCAT 102192 Query 162792 GCTTCAGCAAGA 162803 ||| ||||| || Sbjct 102191 GCTCCAGCAGGA 102180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691454584509840