Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq174905 199 3e-46 seq178594 129 5e-25 >seq174905 Length=21728 Score = 199 bits (220), Expect = 3e-46 Identities = 374/544 (69%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| || ||||| || || |||||||| | || ||| | ||| | Sbjct 16305 ATCTGGCAGATGTACAAGAAAGCGGAGGCGTCGTTCTGGACAGCTGAAGAGATGGATCTC 16364 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 || || || | |||||||| | || | | ||| | || | || |||||| Sbjct 16365 TCGAAGGATCTTCATGACTGGAACAACCGCCTGAACGA-CAACGAGCGCCACTTCATTTC 16423 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| || | || ||||| || || || ||||||||||||||||| || | | ||||| Sbjct 16424 ACACGTTCTCGCTTTCTTCGCGGCGTCTGACGGTATCGTCAATGAAAACCTTCTCGAACG 16483 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || || |||| | ||||| ||||| ||||| |||||||||||| || Sbjct 16484 CTTCTCCGGTGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTTCCAGATTATGAT 16543 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || ||||||| || | ||| | | |||||||| |||||||||| |||| || Sbjct 16544 GGAAAACATCCACTCCGAAACCTACTCTCTCCTCATCGACACGTACATCAAAGAGCCCGC 16603 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 |||| || ||||| | || | || || || || | || || || || || Sbjct 16604 TCAACGCGACTTCCTGTTCGACGCTGTTGAAACCATTCCCTGCATCAAACGCAAGGCTGA 16663 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACA-ACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| |||| |||||| || | || | | || || |||||||| | | || | Sbjct 16664 CTGGGCCCTCAAGTGGATCTCC-GACCAGAGTTCCACTTTCGGTGAACGCCTTGTCGCCT 16722 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| | || ||||| | || || ||| ||||| || | ||||| ||| |||||| Sbjct 16723 TTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGGATGAAGA 16782 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | |||||| | |||||||| |||||||| ||| ||| | || ||||| ||||| | Sbjct 16783 AGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGATGAGGGTA 16842 Query 61622 TGCA 61625 |||| Sbjct 16843 TGCA 16846 Score = 179 bits (198), Expect = 3e-40 Identities = 377/557 (68%), Gaps = 9/557 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| |||||||| || || || ||||| | || || | ||||| Sbjct 15226 ATCTGGCAGATGTACAAGAAGGCGGAGGCATCATTTTGGACTGCTGAAGAACTGGATTTA 15167 Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202 || | ||| | | |||||| | | | ||| | |||| ||||| ||| Sbjct 15166 TCTCACGACCTAATGGACTGGAACAACAATCTAAACGA-CAACGAACGCCATTTTATTTC 15108 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||| | | || |||||||||||||| ||||||||||||||||| ||| | | |||| Sbjct 15107 ACACATCCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATCTTGTTCAACG 15048 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | | || || ||||| | || || || |||||||| || || || ||| || Sbjct 15047 TTTCTCCAACGAAGTACAAGTCGCCGAAGCACGCTGTTTCTATGGGTTTCAAATTATGAT 14988 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||| | |||| || |||||||||| || ||||||| ||| | Sbjct 14987 GGAGAACGTCCACGCAGAGACCTATTCCCTTCTCATCGACACCTACATCAAGGACCCAAA 14928 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || | || | || | ||||| ||||| || || | ||||| || || || Sbjct 14927 TCAAAGAGAGTATCTATTTGACGCCATAGAGACAATTCCTTGCATCAAGCGCAAGGCTGA 14868 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGCTGGCA 61500 |||||| |||| ||||| | | | || | |||| ||||||| ||| || | | || Sbjct 14867 ATGGGCCCTCAAGTGGAT-ATCTG-ACGAAGGCTCCACATTTGCTGAGCGTCTAGTCGCT 14810 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 ||||| | |||||| || | || ||| ||| ||||| || |||| |||||| | ||| Sbjct 14809 TTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGGATAAAG 14750 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || || ||||| || | || || ||||| | || || || ||||| Sbjct 14749 AAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCATCAGCCGAGATGAGGGA 14690 Query 61621 ATGCATTGTGATTTTGC 61637 |||||| ||||| || Sbjct 14689 ATGCATACCGATTTCGC 14673 Score = 113 bits (124), Expect = 4e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | |||||| ||||||||||||||| | || |||| ||||| || Sbjct 17003 ACAGATGCTCTTCCCGTCAGCCTCATCGGCATGAATGCTAAGCTCATGTGCCAGTACATC 17062 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGG-TATGAAGCGGATCTATAATACGAA 61853 || || ||||||||||||||| | || | |||| |||| || |||| || | | Sbjct 17063 GAGTTCGTTGCCGACCGTCTGCTTGTATCTCTGGGCAATGACAAGG-TCTACAACTCCAC 17121 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 ||||| || || |||||||||||||| ||||| | |||||||| || || |||||||| Sbjct 17122 CAACCCCTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAA 17181 Query 61914 ACGTGT 61919 ||||| Sbjct 17182 GCGTGT 17187 >seq178594 Length=29560 Score = 129 bits (142), Expect = 5e-25 Identities = 174/241 (72%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || |||||||| ||||| || ||||| || | ||| || || || |||||| ||||| Sbjct 5390 AAAAGATCAGGAATCCACAGTGCGTAAAACAAATCACGAGCGCGAGACTCCTCCTTGCCG 5449 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | || ||||||||||| || | || ||||||||||| || ||||||||| Sbjct 5450 TGGTTCTTCCTCAGATCGAGGAACTCGAAAACATCCGCATGCCATGGCTCGAGGTAGATG 5509 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC---GACATTGTTG 66520 ||||| | || ||| ||| ||||||||| || || || ||||| | ||| | Sbjct 5510 GCGAAAGCTCCGGGACGCTTGTTGCCACCTTGATCAACATAACGAGCGGTGGCATCAT-- 5567 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGAT 66580 || | || | ||| || |||| ||||| || | |||||||| ||| | ||| |||| Sbjct 5568 -AGGCTCGGAGCATAGGAACGATTCCGTTGGAATAACCATTGGTCCCGGCAATGTAGGAT 5626 Query 66581 C 66581 | Sbjct 5627 C 5627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396683775098960