Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq952 93.3 4e-17 >seq952 Length=5865 Score = 93.3 bits (102), Expect = 4e-17 Identities = 139/189 (74%), Gaps = 10/189 (5%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| ||||||||||||||||| | |||||||| ||| ||||| | |||||| |||| Sbjct 3125 GCACACGGTGGATGCCTAGGCAGTTGGAGGCGATGAAAGACGTAGGAGCCTGCGATAAGC 3066 Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-GATAT 119 | ||||| ||||| | | | |||||| |||| || |||||||| ||||| || Sbjct 3065 TCGGGGGAGCTGGCAAACAAGCTGTGATCCCGAGATCTCTGAATGGGGAAACCCACTTAC 3006 Query 120 ATTGG--AG-AT--ATATCATAACGC-TAGGCGTT--AGGCGAACGTGGGGAACTGAAAC 171 ||| | || || ||| | || | |||| | |||||||| ||||||||||||| Sbjct 3005 ATTAGTAAGTATCCATAACTGAATACATAGGTTATGGAGGCGAACCCGGGGAACTGAAAC 2946 Query 172 ATCTAAGTA 180 ||||||||| Sbjct 2945 ATCTAAGTA 2937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476786179952