Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq952 408 1e-111 seq2990 100 7e-19 >seq952 Length=5865 Score = 408 bits (452), Expect = 1e-111 Identities = 334/402 (83%), Gaps = 3/402 (1%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 4897 AGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTT 4838 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||||| || ||| |||| |||| || ||||||||| Sbjct 4837 AATCGGAATTACTGGGCGTAAAGCGCACGTAGGTGGTTTGTTAAGCTAGCCGTGAAATCC 4778 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTG-CACGACTAGAGTGTGTCAGAGGGGGG 188 ||||||| |||||||| | ||| || |||| || | ||||||| | ||||||| | Sbjct 4777 CCGGGCTCAACCTGGGCACTGCGGTTAGAACTGGCAAG-CTAGAGTAGGGTAGAGGGGTG 4719 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 |||||||||| ||||||| ||||||||||||||||| |||||||||| || ||||||||| Sbjct 4718 TGGAATTCCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGG 4659 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | | |||||| | | |||||| || | | |||||||||||||||||||||||||||| Sbjct 4658 CGACACCCTGGACTCATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAG 4599 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTACTTCCTT 367 |||||||||||||||||||| |||||||| || ||||| |||||| | || ||| Sbjct 4598 ATACCCTGGTAGTCCACGCCGTAAACGATGTCTACTAGCCGTTGGGAGCCTTGAGCTCTT 4539 Query 368 GGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| |||| ||||||||||||| ||| Sbjct 4538 AGTGGCGCAGCTAACGCACTAAGTAGACCGCCTGGGGAGTAC 4497 >seq2990 Length=21855 Score = 100 bits (110), Expect = 7e-19 Identities = 107/139 (77%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 |||||| |||||| | | |||| || || ||||| ||||| ||| | |||| Sbjct 15213 GTGTAGGGCTGAAATCCATTGATACTCAGACGACTACCAAGAGCGAAAGCACCGAGCTGG 15154 Query 260 GATAAC-ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 | |||| | ||||||||| | |||| |||||||||||| || ||||||||||||| || Sbjct 15153 G-TAACGATTGACGCTCAGGGACGACAGCGTGGGGAGCGAAACGGATTAGATACCCGAGT 15095 Query 319 AGTCCACGCCCTAAACGAT 337 |||||||||| |||||||| Sbjct 15094 AGTCCACGCCGTAAACGAT 15076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289561415168