Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq952 168 9e-40 seq2989 77.0 5e-12 >seq952 Length=5865 Score = 168 bits (186), Expect = 9e-40 Identities = 189/251 (75%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 1302 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 1360 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||| |||||||| || || | ||| ||||| || ||| | Sbjct 1361 GTGCTGTGTTTTTAATAAACAGTTGCAGGGGACTGGTATCTTCGACCGGCATGGGCTTAC 1420 Query 122 ----CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || ||| |||||| || || | ||||||||||||||||||| ||||||||||| Sbjct 1421 GGAGCAAGTCCTTCACCCTCACCGGTGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCC 1480 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 | |||||| ||| ||||| | | | |||||| ||||||||||||| |||||||||||| Sbjct 1481 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTC 1540 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 1541 GGTTTGGGGTA 1551 >seq2989 Length=10188 Score = 77.0 bits (84), Expect = 5e-12 Identities = 163/237 (69%), Gaps = 11/237 (5%) Strand=Plus/Minus Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGACT-TACCGTCTTCGCACGGACCTGTGTTT 72 ||| ||||| || |||||| ||||| |||| || || ||||| ||||||||||| Sbjct 8479 CACTGGGCAAGCCTCAGTCGCTATACTACGACGCTAA--TCATCGCAGCGACCTGTGTTT 8422 Query 73 TTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCA 132 | |||||||||||| | | | ||||| ||| |||| | | | || || || Sbjct 8421 TAGGTAAACAGTCGCAGCTCACGATTCTGTGCCGCCAC-----GGACTGCGCGGTGTGCA 8367 Query 133 CCAGCAGTGGCACCCCTT-CTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCA 191 | | ||||| ||||| | || || |||||| ||||||||||| |||||| | Sbjct 8366 CTGTCCGTGGCCTCCCTTATTGCCAAACGTACGGGAGCATTTTGCCGAGTTCCTTGAGTG 8307 Query 192 CAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | |||||| | || | | || | || ||| | |||||||||||||| ||||| Sbjct 8306 CCGTTCACTC-TACCCATCGGTGTGCTACACCAGCGAACCTGTGTCGGTTT-CGGTA 8252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694379872816