Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq952 488 1e-135 >seq952 Length=5865 Score = 488 bits (540), Expect = 1e-135 Identities = 332/368 (90%), Gaps = 4/368 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 4957 CTTTACAATCCGAGGGCCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 5014 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5015 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 5074 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 5075 TGTGACTGATCATCCTCTCAGACCAGTTACAGATCGTCGCCTTGGTGAGCCTTTACCTCA 5134 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||| |||||||| ||| | |||||||||||||||| ||| |||||| ||||| ||| Sbjct 5135 CCAACAAGCTAATCTGACATGGGCTCATCTGATAGCGAGAGGTCCGAAGATCCCCCCCTT 5194 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||||||| |||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 5195 TCCCCCGTAGGGCGTATGCGGTATTAGCGTCCCTTTCGAGACGTTGTCCCCCACTACCAG 5254 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT-CTCAAGAGAAGCAAGCTTCTCTCT 359 ||||||||| | ||||||||||||||| ||||||| | || | |||||||| | || Sbjct 5255 GCAGATTCCCATGCATTACTCACCCGTTCGCCGCTGCATCAG-GTAGCAAGCTACCTTCA 5313 Query 360 ACCGCTCG 367 |||||||| Sbjct 5314 ACCGCTCG 5321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071967925760