Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq952 277 3e-72 seq2989 136 6e-30 >seq952 Length=5865 Score = 277 bits (306), Expect = 3e-72 Identities = 226/273 (83%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 |||||| |||| |||||||||| |||||| ||||||| ||| || ||||| || || Sbjct 384 AGGAGG-CTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCGCACGTAGCTACCGGGC 442 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 ||| |||||| ||||| | |||||||||| || ||| |||||||||||||||| Sbjct 443 AGTGCCGTTGGCACGACAACCCGAACACCAGAGGTGCGTTCATTCCGGTCCTCTCGTACT 502 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | ||| ||| |||||||| ||| ||||||||| | |||||||||||||||||||| || Sbjct 503 AGGAACAACTCTTCTCAAATCTCCAACGCCCACGGCAGATAGGGACCGAACTGTCTCACG 562 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||| |||||||||||||| || |||||| ||||||||||| |||||||||||| Sbjct 563 ACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCG 622 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||||||||| || |||||||||||| Sbjct 623 GCTTCAGCCCCAGGATGTGATGAGCCGACATCG 655 >seq2989 Length=10188 Score = 136 bits (150), Expect = 6e-30 Identities = 205/288 (71%), Gaps = 24/288 (8%) Strand=Plus/Minus Query 8 GGCTTCGGGCTT-AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATG 66 ||||||| ||| ||||||| |||| |||||| | | | ||||| ||| | |||| || Sbjct 9401 GGCTTCGCTCTTCAGATGCCGTCAGAGCTTATCACATGCGAACTTGGCTGCTCAGCGGTG 9342 Query 67 CACTTGGCAGT-------------ACAACTGGTGCACCAGAGGTTTGTC--CATCCCGGT 111 | | ||| ||||||| ||||| ||||||| | | || | |||| Sbjct 9341 CCAGTCTGAGTGATCTCAGAGCCGACAACTGATGCACTAGAGGTTCGCCAGCA-CTCGGT 9283 Query 112 CCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCC--CACGACG--GATAGGGA 167 ||| |||||||| | | | ||| | ||| || ||| | || || |||||||| Sbjct 9282 CCTTTCGTACTAGAGGCTGGTCCGCC---ATTGACTGCGCGTGCTCGCCGAAGATAGGGA 9226 Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 ||| |||| ||| || ||| ||||||||| ||||||||||| |||| ||||||||||| Sbjct 9225 CCGTACTGGCTCACGCCGTACTGAACCCAACTCGCGTGCCTTTTTACCCGGCGAACAGCC 9166 Query 228 CAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||| ||||| | |||| |||||| ||||||| |||||||| Sbjct 9165 GGACCCTTGCTACCTAATGCAGCAGCAGGATAAGACGAGTCGACATCG 9118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780777368512