Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq952 378 2e-102 seq2990 96.9 8e-18 seq1206 84.2 5e-14 >seq952 Length=5865 Score = 378 bits (418), Expect = 2e-102 Identities = 322/396 (81%), Gaps = 1/396 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| || Sbjct 4892 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCG 4833 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | |||||||||||| ||||| || |||||| | || Sbjct 4832 GAATTACTGGGCGTAAAGCGCACGTAGGTGGTTTGTTAAGCTAGCCGTGAAATCCCCGGG 4773 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| || ||||| || ||||| |||||||| | || || ||||||| Sbjct 4772 CTCAACCTGGGCACTGCGGTTAGAACTGGCAAGCTAGAGTAGGGTAGAGGGGTGTGGAAT 4713 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 ||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| | Sbjct 4712 TCCAGGTGTAGCGGTGAAATGCGTAGATATCTGGAGGAACATCAGTGGCGAAGGCGACAC 4653 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4652 CCTGGACTCATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 4593 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||||||||||||||||| |||||| || ||| | | || || ||| Sbjct 4592 TGGTAGTCCACGCCGTAAACGATGTCTACTAGCCGTTGGGAGCCTTGAGCTCT-TAGTGG 4534 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| |||||| |||||| || ||||||||||| Sbjct 4533 CGCAGCTAACGCACTAAGTAGACCGCCTGGGGAGTA 4498 >seq2990 Length=21855 Score = 96.9 bits (106), Expect = 8e-18 Identities = 108/143 (76%), Gaps = 6/143 (4%) Strand=Plus/Minus Query 197 AGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTG 256 ||||||| | |||||| | | |||| | || || |||| ||||| || | |||| Sbjct 15214 AGTGTAGGGCTGAAATCCATTGATACTCAGACGACTACCAAGAGCGAAAGCACCGAGCTG 15155 Query 257 GACTGTAAC---TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 313 | ||||| |||| || ||| ||| |||||||||||| || ||||||||||||| Sbjct 15154 G---GTAACGATTGACGCTCAGGGACGACAGCGTGGGGAGCGAAACGGATTAGATACCCG 15098 Query 314 GGTAGTCCACGCCGTAAACGATG 336 |||||||||||||||||||||| Sbjct 15097 AGTAGTCCACGCCGTAAACGATG 15075 >seq1206 Length=4746 Score = 84.2 bits (92), Expect = 5e-14 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||| || | |||| | | |||| | |||| ||||||| || |||||||||| Sbjct 4743 GAATTTCTGGAGTAGAGATAAAATTTGATGATACCAGGAGGACTGTCAACGGCGAAGGCG 4684 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | | || |||||||| |||| |||| || |||| ||||||||||||||||| Sbjct 4683 TCCTTCTATGTAATAACTGACGTTGAGAGACGAAGGCTTGGGTAGCAAACAGGATTAGAT 4624 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||| ||||||| || | || ||||||| Sbjct 4623 ACCCTAATAGTCCAAGCAGACAATGATGAAT 4593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203164000256