Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq952 390 4e-106 >seq952 Length=5865 Score = 390 bits (432), Expect = 4e-106 Identities = 432/566 (76%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| || |||||| ||||||||||| ||||||||||||| | |||||| ||| Sbjct 2519 CGAGTCTTAATAGGGCGCTTTAGTCGCTGGGTATAGACCCGAAACCGGGCGATCTATCCA 2460 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||||| |||||||| ||||||| ||||||| |||| |||||||| Sbjct 2459 TGGGCAGGTTGAAGGTTAGGTAACACTGACTGGAGGACCGAACCGACTACCGTTGAAAAG 2400 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 |||| |||||| |||||| | || |||||||||||| ||| || ||| |||||||||||| Sbjct 2399 TTAGCGGATGACCTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCT 2340 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 | ||||| |||||||||||| ||||| ||||||| ||||||||||||||||| | Sbjct 2339 CCTCGAAAGCTATTTAGGTAGCGCCTCGTGTATCACTGCTGGGGGTAGAGCACTGTTTCG 2280 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATC-AGTTTTA 298 ||||||||||||| |||||||||||||| |||||||||||||| | || | ||| | | Sbjct 2279 GCTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATAC-CAGCAAGTGTCA 2221 Query 299 CCGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | |||||| | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 2220 GCACGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGAC 2163 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 |||||||||| ||| || | | | ||||| | ||||| || || ||| |||| Sbjct 2162 CGTCAGCTAAGGTCCCAAAGTTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGAC 2105 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||| |||||||| |||||||||| || |||||||| |||||| ||||||||||| Sbjct 2104 AGCTAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTAGT 2046 Query 477 CGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG--- 532 |||| | | ||| ||| || | |||| | || | |||||||| ||| Sbjct 2045 CGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACCATACACCGAAGCTACGGGTTC 1986 Query 533 ATCATTTATATGATCGGTAGGGGAGC 558 ||| ||| |||| |||||| ||||| Sbjct 1985 ATCCTTTGGATGAGCGGTAGAGGAGC 1960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689549447168