Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq952 235 1e-59 seq2989 82.4 1e-13 >seq952 Length=5865 Score = 235 bits (260), Expect = 1e-59 Identities = 252/326 (77%), Gaps = 14/326 (4%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||| ||| || |||||||||| ||||||| ||| ||||||| Sbjct 3128 AGCGCACACGGTGGATGCCTAGGCAGTTGGAGGCGATGAAAGACGTAGGAGCCTGCGATA 3069 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||| ||||||| || |||||| |||| || |||||||||||||| Sbjct 3068 AGCTCGGGGGAGCTGGCAAACAAGCTGTGATCCCGAGATCTCTGAATGGGGAAACCCA-- 3011 Query 121 CCTT---TGGGTCATTG--CATG-CTGAATACATAGGT-ATGCAAAGCGAACGCGGCGAA 173 ||| | || | | ||| |||||||||||||| ||| | |||||| ||| ||| Sbjct 3010 -CTTACATTAGTAAGTATCCATAACTGAATACATAGGTTATGGAG-GCGAACCCGGGGAA 2953 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | | |||||||||||||||||||||||||| ||||| ||||| Sbjct 2952 CTGAAACATCTAAGTACCCGGAGGAAAAGAAATCAACCGAGATTCCCTCAGTAGCGGCGA 2893 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAG 293 |||||| |||| |||| ||| | | | | || |||||||| ||||||||| | Sbjct 2892 GCGAAAGGGGACCAGCCCTTAAG---TGGCTTTGGTGTTAGTGGAAGGCTCTGGAAAGTG 2836 Query 294 GAGCCATAGCGGGTGATAGCCCCGTA 319 || ||| |||||||||||||||| Sbjct 2835 CCGCGATACAGGGTGATAGCCCCGTA 2810 >seq2989 Length=10188 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 164 ACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAA 223 || |||| ||| || ||||| ||||||| | |||||| ||||||||||||||||| || Sbjct 6843 ACCCGGCCAACGGAGACATCCAAGTAGCCGGTGGAAAAAAAATCAACCGAGATTCCGTAA 6902 Query 224 GTAGTGGCGAGCGAA 238 |||| |||||||||| Sbjct 6903 GTAGCGGCGAGCGAA 6917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918372521472