Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq68 787 0.0 seq221 136 1e-29 seq895 134 5e-29 seq571 123 8e-26 seq1604 82.4 2e-13 >seq68 Length=10983 Score = 787 bits (872), Expect = 0.0 Identities = 497/537 (93%), Gaps = 3/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2308 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATC 2367 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2368 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 2427 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| ||||||||||| || | || ||| || || |||| ||||| ||||||| Sbjct 2428 AGCCCGTAAAGGACCTTAAAGCTAAAAGGTGGGACGTTAATCCCAGCTCCGCATCATTGA 2487 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 2488 ATAAGTAAAAAGACGATAAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 2544 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 2545 TTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 2604 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2605 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 2664 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2665 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 2724 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2725 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 2784 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2785 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2841 >seq221 Length=9899 Score = 136 bits (150), Expect = 1e-29 Identities = 80/83 (96%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 83 TCTTCTTTCCCAGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 24 Query 362 AGATAGGGACAGTGGGAATCTCG 384 ||||||||||||||||||| ||| Sbjct 23 AGATAGGGACAGTGGGAATATCG 1 >seq895 Length=6127 Score = 134 bits (148), Expect = 5e-29 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 6127 TTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGC 6068 Query 85 CCCAGCCAAACTCCCCACCTGA 106 |||||||||||||||||||||| Sbjct 6067 CCCAGCCAAACTCCCCACCTGA 6046 >seq571 Length=7640 Score = 123 bits (136), Expect = 8e-26 Identities = 73/76 (96%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 42 TCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7565 TCCCCCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 7624 Query 102 CCTGACAATGTCATCA 117 |||||||||||| ||| Sbjct 7625 CCTGACAATGTCTTCA 7640 >seq1604 Length=3330 Score = 82.4 bits (90), Expect = 2e-13 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 371 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3283 CCCAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 3330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635151074816