Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq41 111 1e-19 seq2512 109 4e-19 >seq41 Length=11186 Score = 111 bits (122), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | ||||||| | || || Sbjct 5269 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACCTG 5210 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||| || | | | ||| | || | || ||||| Sbjct 5209 TCCAAGGACATGCACGACTGGCAGAACAAGCTCAACGA-CAACGAGCGCCACTTCATCTC 5151 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || ||| | || ||||| ||||| || ||||| |||||||| ||||| | | || || Sbjct 5150 CCACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGCG 5091 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| | ||||| || || | ||||| || || ||||| ||||||||||| Sbjct 5090 CTTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGAT 5037 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 ||||| ||||| || ||||| |||||| |||||||| | |||||||||||||| Sbjct 4249 ATCGAGCAGGAGTTCCTGACGGACGCTCTGCCCGTCGCGCTCATCGGCATGAACGCCAAG 4190 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 || |||| ||||| || || || || |||||||| ||| | |||| | || | || Sbjct 4189 CTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGAG 4130 Query 61837 CGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | ||| || | | ||||| || || |||||||| |||||||| ||| | || ||| Sbjct 4129 AAGTACTACAACTCCACGAACCCCTTCGACTTCATGGAGATGATTTCCCTGCAAGGGAAG 4070 Query 61897 ACGAA 61901 || || Sbjct 4069 ACCAA 4065 >seq2512 Length=16788 Score = 109 bits (120), Expect = 4e-19 Identities = 112/145 (77%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 66323 TCCT-GTTCTACACGACGC-----ATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGA 66376 |||| ||||| | |||||| ||||| || || || |||||||| ||||||||||| Sbjct 6876 TCCTCGTTCTTCTCGACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGAAGAGG 6935 Query 66377 TCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATG 66436 || || || || |||||| ||||||| || ||||||| |||||||||||| |||| | Sbjct 6936 TCACGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACG 6995 Query 66437 TCGGCATGCCATGGTTCCAGGTAGA 66461 || || ||||| || || | ||||| Sbjct 6996 TCCGCGTGCCACGGCTCGATGTAGA 7020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553502682880